narupatoolsΒΆ

Narupatools is a package containing utilities to make working with Narupa easier.

Modules

app

Application-level code for clients and servers.

ase

Runners and utilities for interfacing between ASE and Narupa.

core

Core code that is useful across narupatools.

frame

Code for handling FrameData and other related objects.

imd

Module for code relating to interactive molecular dynamics.

lammps

Interpolability with the LAMMPS package.

mdanalysis

Code for interface with the MDAnalysis package.

mdtraj

Utilities for interfacing with the MDTraj package.

nglview

Code for interfacing with NGLView.

openmm

Classes and methods for interfacing with the OpenMM package.

physics

Methods relating to calculating physical quantities.

state

Classes and methods for dealing with Narupa shared state in a more intuitive way.