narupatools.frame.fields

Standard fields and their getters/setters for Narupa frames.

Module Attributes

ParticlePositions

ParticleVelocities

ParticleForces

ParticleElements

ParticleResidues

ParticleNames

ParticleTypes

ParticleMasses

ParticleCharges

ParticleCount

PotentialEnergy

KineticEnergy

SimulationElapsedTime

SimulationTotalTime

SimulationElapsedSteps

SimulationTotalSteps

BondPairs

BondOrders

BondTypes

BondCount

ResidueNames

ResidueIds

ResidueChains

ResidueCount

ChainNames

ChainCount

BoxVectors

DYNAMIC_FIELDS

Set of fields that are by default considered to change when a simulation is run.

Functions

get_frame_key

Get the defined FrameKey for a given string key.

narupatools.frame.fields.get_frame_key(key: str)narupatools.frame.fields.FrameKey

Get the defined FrameKey for a given string key.

Parameters

key – Key as it appears in the frame data.

Classes

FrameKey(key)

Key that can be placed in a Narupa FrameData, such as positions or potential energy.